C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amyloid beta (A4) precursor protein-binding, family A, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138829 Apba2-004 ENSMUSG00000030519 10090 + 7:64501949-64695307 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLungOvaryENSMUST00000138829
Transcript ID Adrenal Breast Colon Kidney Lung Ovary
ENSMUST00000138829 0.204±0.03 0.124±0.02 0.649±0.00 0.092±0.02 0.332±0.00 0.668±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007CR CIL_0007CR_0002 CGP 7:64392645-64753870
CIL_0006HE CIL_0006HE_0002 CGP 7:64501706-65156570

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IGI in utero embryonic development
GO:0005515 IPI protein binding
GO:0007268 IGI synaptic transmission
GO:0007626 IGI locomotory behavior
GO:0010468 IGI regulation of gene expression
GO:0035264 IGI multicellular organism growth

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000558330 APBA2-002 protein_coding Homo_sapiens 2e-39 169
ENST00000558402 APBA2-001 protein_coding Homo_sapiens 3e-39 169
ENST00000559709 APBA2-007 protein_coding Homo_sapiens 0.00000000003 73
ENST00000559814 APBA2-003 retained_intron Homo_sapiens 0.000000000003 79

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