C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | SUMO-interacting motifs containing 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000138869  |
Simc1-003 |
ENSMUSG00000043183 |
10090 | + |
13:54503809-54539856  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00098R | CIL_00098R_0002 | VISTA | 13:54491283-55092527 |
| CIL_0002DK | CIL_0002DK_0002 | CGP | 13:54503779-54565435 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005575 | ND | cellular_component |
| GO:0008150 | ND | biological_process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000341199
|
SIMC1-201 | protein_coding | Homo_sapiens | 0 | 383 |
|
ENST00000429602
|
SIMC1-202 | protein_coding | Homo_sapiens | 0 | 383 |
|
ENST00000430704
|
SIMC1-002 | protein_coding | Homo_sapiens | 0 | 383 |
|
ENST00000443967
|
SIMC1-001 | protein_coding | Homo_sapiens | 0 | 383 |
|
ENST00000467472
|
SIMC1-007 | processed_transcript | Homo_sapiens | 1e-27 | 126 |
|
ENST00000481515
|
SIMC1-004 | retained_intron | Homo_sapiens | 0 | 385 |
|
ENST00000495423
|
SIMC1-006 | retained_intron | Homo_sapiens | 3e-27 | 126 |
|
ENST00000499314
|
RP11-1277A3.2-003 | processed_transcript | Homo_sapiens | 9e-28 | 128 |
|
ENST00000500444
|
RP11-1277A3.2-001 | transcribed_unprocessed_pseudogene | Homo_sapiens | 2e-27 | 126 |
