C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cap methyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138939 Cmtr1-002 ENSMUSG00000024019 10090 + 17:29687056-29703359 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000138939
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000138939 14.192±2.54 16.049±1.26 8.740±0.00 12.301±0.00 20.721±5.43 9.285±0.00 11.791±0.37 10.693±1.94 12.054±1.56 12.796±1.38 4.811±0.37 14.071±2.88 13.805±6.86 11.402±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089L CIL_00089L_0002 VISTA 17:29133661-29735358
CIL_0001Z5 CIL_0001Z5_0002 CGP 17:29614876-29705979
CIL_0001Z6 CIL_0001Z6_0002 CGP 17:29660595-29717012

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373451 CMTR1-001 protein_coding Homo_sapiens 0 1212
ENST00000455891 CMTR1-002 protein_coding Homo_sapiens 0 372
ENST00000457419 CMTR1-007 protein_coding Homo_sapiens 0 346
ENST00000475364 CMTR1-004 nonsense_mediated_decay Homo_sapiens 0 318
ENST00000493656 CMTR1-003 processed_transcript Homo_sapiens 4e-39 165

Loading