C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoribosyl pyrophosphate synthetase 1-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139049 Prps1l3-001 ENSMUSG00000079104 10090 + 12:57230412-57239882 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000139049
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000139049 9.012±4.48 18.048±0.85 6.966±1.59 3.238±1.10 11.264±2.19 8.992±0.94 2.734±1.04 8.424±0.96 10.214±2.70 10.205±1.47 2.594±0.40 18.500±3.68 8.512±3.50 9.265±1.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LS CIL_0007LS_0003 UCNEbase 12:55566857-57467023
CIL_00092Q CIL_00092Q_0002 VISTA 12:56991377-57592384

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0004749 IEA ribose phosphate diphosphokinase activity
GO:0005575 ND cellular_component
GO:0009156 IEA ribonucleoside monophosphate biosynthetic process
GO:0009165 IEA nucleotide biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372418 PRPS1-003 protein_coding Homo_sapiens 0 896
ENST00000372419 PRPS1-002 protein_coding Homo_sapiens 0 625
ENST00000372428 PRPS1-201 protein_coding Homo_sapiens 0 725
ENST00000372435 PRPS1-001 protein_coding Homo_sapiens 0 1515
ENST00000430496 PRPS1P2-001 processed_pseudogene Homo_sapiens 0 974
ENST00000506618 PRPS1L1-001 protein_coding Homo_sapiens 0 1254

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