C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: breast carcinoma amplified sequence 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139489 Bcas2-004 ENSMUSG00000005687 10090 + 3:103171749-103178827 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonLiverLungOvaryENSMUST00000139489
Transcript ID Adipose Brain Breast Colon Liver Lung Ovary
ENSMUST00000139489 1.763±0.73 4.850±1.34 1.684±0.52 2.204±0.00 0.968±0.00 2.384±0.33 1.538±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003RY CIL_0003RY_0002 CGP 3:103102604-103179166
CIL_0006WV CIL_0006WV_0002 CGP 3:103171655-103358768

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369541 BCAS2-001 protein_coding Homo_sapiens 0 608
ENST00000416374 BCAS2P3-001 processed_pseudogene Homo_sapiens 0 340
ENST00000425064 BCAS2P2-001 processed_pseudogene Homo_sapiens 0 508
ENST00000485021 BCAS2-002 processed_transcript Homo_sapiens 0 278

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