C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 36
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139900 Lrrc36-002 ENSMUSG00000054320 10090 + 8:105413571-105443753 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005JX CIL_0005JX_0002 CGP 8:105382807-105464086
CIL_0005JY CIL_0005JY_0002 CGP 8:105413571-105471526

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329956 LRRC36-001 protein_coding Homo_sapiens 0 660
ENST00000435835 LRRC36-009 protein_coding Homo_sapiens 0 217
ENST00000561821 LRRC36-016 nonsense_mediated_decay Homo_sapiens 7e-22 108
ENST00000563189 LRRC36-004 protein_coding Homo_sapiens 0 217
ENST00000563303 LRRC36-010 processed_transcript Homo_sapiens 0 374
ENST00000565019 LRRC36-008 nonsense_mediated_decay Homo_sapiens 0 664
ENST00000566558 LRRC36-019 processed_transcript Homo_sapiens 0 558
ENST00000567211 LRRC36-002 nonsense_mediated_decay Homo_sapiens 2e-21 108
ENST00000567723 LRRC36-003 nonsense_mediated_decay Homo_sapiens 0 191
ENST00000567823 LRRC36-005 nonsense_mediated_decay Homo_sapiens 0 191
ENST00000568010 LRRC36-007 nonsense_mediated_decay Homo_sapiens 0 217
ENST00000568804 LRRC36-011 protein_coding Homo_sapiens 0 652
ENST00000569228 LRRC36-020 retained_intron Homo_sapiens 0 660
ENST00000569499 LRRC36-012 protein_coding Homo_sapiens 0 617
ENST00000569552 LRRC36-013 nonsense_mediated_decay Homo_sapiens 0.00000000000005 82
ENST00000570075 LRRC36-015 nonsense_mediated_decay Homo_sapiens 0 473

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