C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: musashi RNA-binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139918 Msi1-006 ENSMUSG00000054256 10090 + 5:115433751-115450899 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartLiverLungENSMUST00000139918
Transcript ID Breast Heart Liver Lung
ENSMUST00000139918 0.353±0.00 0.121±0.02 0.048±0.00 0.775±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZA CIL_0007ZA_0002 VISTA 5:114966986-115567561
CIL_0009CQ CIL_0009CQ_0002 VISTA 5:115188390-115791906

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257552 MSI1-001 protein_coding Homo_sapiens 0 953
ENST00000276123 ZNF711-002 protein_coding Homo_sapiens 0.00001 55
ENST00000306422 OTP-001 protein_coding Homo_sapiens 0.00002 57
ENST00000373165 ZNF711-001 protein_coding Homo_sapiens 0.00001 55
ENST00000546622 MSI1-003 processed_transcript Homo_sapiens 0 411
ENST00000546985 MSI1-002 protein_coding Homo_sapiens 0 606

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