C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | TRIO and F-actin binding protein | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000140228  |
Triobp-003 |
ENSMUSG00000033088 |
10090 | + |
15:78947724-78968842  |
processed_transcript |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00099H | CIL_00099H_0002 | VISTA | 15:78863840-79464236 |
| CIL_0008KJ | CIL_0008KJ_0002 | VISTA | 15:78865517-79466323 |
| CIL_0008BX | CIL_0008BX_0002 | VISTA | 15:78873761-79474273 |
| CIL_0008KA | CIL_0008KA_0002 | VISTA | 15:78875821-79476550 |
| CIL_00082J | CIL_00082J_0002 | VISTA | 15:78908803-79509777 |
| CIL_0008C1 | CIL_0008C1_0002 | VISTA | 15:78918952-79520098 |
| CIL_00082K | CIL_00082K_0002 | VISTA | 15:78923635-79524085 |
| CIL_00040B | CIL_00040B_0002 | CGP | 15:78934933-79005867 |
| CIL_0001D1 | CIL_0001D1_0002 | CGP | 15:78947724-79030498 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000344404
|
TRIOBP-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 1271 |
|
ENST00000406386
|
TRIOBP-001 | protein_coding | Homo_sapiens | 0 | 1271 |
|
ENST00000455236
|
RP1-37E16.12-001 | nonsense_mediated_decay | Homo_sapiens | 0 | 1279 |
|
ENST00000492485
|
TRIOBP-003 | retained_intron | Homo_sapiens | 0 | 1317 |
