C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | CDK5 regulatory subunit associated protein 1-like 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000140278  |
Cdkal1-007 |
ENSMUSG00000006191 |
10090 | - |
13:29191746-29855647  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00084D | CIL_00084D_0002 | VISTA | 13:28658215-29260360 |
| CIL_0005MW | CIL_0005MW_0002 | CGP | 13:28948919-29855674 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005783 | IDA | endoplasmic reticulum |
| GO:0005791 | IDA | rough endoplasmic reticulum |
| GO:0016021 | IEA | integral component of membrane |
| GO:0035598 | IMP | N6-threonylcarbomyladenosine methylthiotransferase activity |
| GO:0035600 | IMP | tRNA methylthiolation |
| GO:0046872 | IEA | metal ion binding |
| GO:0051539 | IEA | 4 iron, 4 sulfur cluster binding |
| GO:1990145 | IMP | maintenance of translational fidelity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000274695
|
CDKAL1-201 | protein_coding | Homo_sapiens | 0 | 1877 |
|
ENST00000378610
|
CDKAL1-001 | protein_coding | Homo_sapiens | 0 | 1849 |
|
ENST00000380523
|
GEMIN8-001 | protein_coding | Homo_sapiens | 0.0000002 | 62 |
|
ENST00000613575
|
CDKAL1-202 | protein_coding | Homo_sapiens | 0 | 337 |
