C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140348 Psmd4-008 ENSMUSG00000005625 10090 - 3:95032704-95035267 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENSMUST00000140348
Transcript ID Ovary Placenta Testis
ENSMUST00000140348 56.292±0.00 104.096±35.68 230.519±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008540 IEA proteasome regulatory particle, base subcomplex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368881 PSMD4-002 protein_coding Homo_sapiens 0 636
ENST00000368884 PSMD4-001 protein_coding Homo_sapiens 0 579
ENST00000445776 PSMD4-008 protein_coding Homo_sapiens 0 704
ENST00000476855 PSMD4-006 retained_intron Homo_sapiens 2e-35 154
ENST00000480546 PIPSL-002 processed_transcript Homo_sapiens 0 534
ENST00000489875 PIPSL-001 transcribed_processed_pseudogene Homo_sapiens 0 501
ENST00000491857 PSMD4-009 retained_intron Homo_sapiens 2e-26 122

Loading