C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sodium channel and clathrin linker 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140373 Sclt1-006 ENSMUSG00000059834 10090 - 3:41657224-41673275 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryENSMUST00000140373
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENSMUST00000140373 0.267±0.09 1.309±0.16 0.384±0.00 0.823±0.00 0.303±0.08 0.603±0.31 0.275±0.00 0.721±0.20 0.297±0.06 2.156±1.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00001M CIL_00001M_0002 CGP 3:41555734-41742514
CIL_0006YI CIL_0006YI_0003 CGP 3:41626717-41759389

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281142 SCLT1-001 protein_coding Homo_sapiens 0 955
ENST00000439369 SCLT1-004 protein_coding Homo_sapiens 0 263
ENST00000502495 SCLT1-007 processed_transcript Homo_sapiens 0 861
ENST00000503215 SCLT1-005 protein_coding Homo_sapiens 0 263
ENST00000503565 SCLT1-009 processed_transcript Homo_sapiens 0 322
ENST00000506233 SCLT1-006 retained_intron Homo_sapiens 0 955

Loading