C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: breast carcinoma amplified sequence 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140562 Bcas3-009 ENSMUSG00000059439 10090 + 11:85821966-85825307 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000569 CIL_000569_0003 CGP 11:85311244-85826058
CIL_000703 CIL_000703_0002 CGP 11:85353167-85841948

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000390652 BCAS3-001 protein_coding Homo_sapiens 2e-40 172
ENST00000407086 BCAS3-002 protein_coding Homo_sapiens 2e-40 172
ENST00000408905 BCAS3-013 protein_coding Homo_sapiens 6e-40 171
ENST00000585744 BCAS3-005 protein_coding Homo_sapiens 9.99995e-41 172
ENST00000585812 BCAS3-008 processed_transcript Homo_sapiens 4.00001e-40 171
ENST00000587294 BCAS3-031 processed_transcript Homo_sapiens 2e-40 171
ENST00000588462 BCAS3-012 protein_coding Homo_sapiens 6e-40 171
ENST00000588569 BCAS3-033 processed_transcript Homo_sapiens 0 305
ENST00000588720 BCAS3-010 retained_intron Homo_sapiens 2e-40 172
ENST00000588874 BCAS3-006 protein_coding Homo_sapiens 9.99995e-41 172
ENST00000589222 BCAS3-004 protein_coding Homo_sapiens 0 305
ENST00000592702 BCAS3-009 processed_transcript Homo_sapiens 9.99995e-41 172

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