C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1M
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140761 Ppm1m-001 ENSMUSG00000020253 10090 - 9:106194172-106199275 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000140761
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000140761 32.728±8.94 96.342±23.90 7.054±1.26 2.397±1.22 36.378±16.70 9.401±0.77 2.748±0.46 7.572±2.08 5.198±1.34 16.489±5.53 0.677±0.30 21.084±10.54 4.952±1.63 5.974±2.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NT CIL_0008NT_0002 VISTA 9:106082995-106685663
CIL_00087C CIL_00087C_0002 VISTA 9:106116951-106718793

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004721 IDA phosphoprotein phosphatase activity
GO:0005634 IDA nucleus
GO:0006470 IDA protein dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296487 PPM1M-001 protein_coding Homo_sapiens 0 1182
ENST00000323588 PPM1M-201 protein_coding Homo_sapiens 0 1535
ENST00000409502 PPM1M-004 protein_coding Homo_sapiens 0 894
ENST00000457454 PPM1M-006 protein_coding Homo_sapiens 0 603

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