C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SAP30 binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140991 Sap30bp-001 ENSMUSG00000020755 10090 + 11:115933282-115966725 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000140991
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000140991 4.312±1.04 5.559±2.46 12.166±1.18 12.306±4.50 3.182±0.82 3.099±0.39 9.867±0.92 4.676±2.57 4.683±1.43 3.339±0.78 10.006±3.69 9.026±3.13 5.942±1.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0002 VISTA 11:115369788-115971497
CIL_0007IO CIL_0007IO_0002 CGP 11:115892595-115933477
CIL_0002K8 CIL_0002K8_0003 CGP 11:115933282-116008412

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006915 IEA apoptotic process
GO:0010942 ISS positive regulation of cell death

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293208 SAP30BP-005 nonsense_mediated_decay Homo_sapiens 0 529
ENST00000355423 SAP30BP-002 protein_coding Homo_sapiens 0 891
ENST00000542343 SAP30BP-003 nonsense_mediated_decay Homo_sapiens 0 597
ENST00000577292 SAP30BP-019 retained_intron Homo_sapiens 0 597
ENST00000578288 SAP30BP-007 retained_intron Homo_sapiens 0 322
ENST00000578354 SAP30BP-016 processed_transcript Homo_sapiens 0 340
ENST00000578756 SAP30BP-021 retained_intron Homo_sapiens 0 532
ENST00000578909 SAP30BP-017 protein_coding Homo_sapiens 0 385
ENST00000579005 SAP30BP-025 processed_transcript Homo_sapiens 0 257
ENST00000579864 SAP30BP-018 processed_transcript Homo_sapiens 0 582
ENST00000579877 SAP30BP-013 nonsense_mediated_decay Homo_sapiens 0 617
ENST00000580322 SAP30BP-008 nonsense_mediated_decay Homo_sapiens 0 835
ENST00000580484 SAP30BP-024 retained_intron Homo_sapiens 0 582
ENST00000580601 SAP30BP-009 retained_intron Homo_sapiens 0 893
ENST00000581207 SAP30BP-023 retained_intron Homo_sapiens 0 361
ENST00000582022 SAP30BP-006 nonsense_mediated_decay Homo_sapiens 0 579
ENST00000583063 SAP30BP-027 protein_coding Homo_sapiens 0 531
ENST00000583170 SAP30BP-011 nonsense_mediated_decay Homo_sapiens 0 220
ENST00000583329 SAP30BP-020 retained_intron Homo_sapiens 0 531
ENST00000583536 SAP30BP-015 protein_coding Homo_sapiens 0 894
ENST00000583737 SAP30BP-014 nonsense_mediated_decay Homo_sapiens 0 385
ENST00000584240 SAP30BP-026 protein_coding Homo_sapiens 0 468
ENST00000584557 SAP30BP-010 retained_intron Homo_sapiens 0 261
ENST00000584667 SAP30BP-001 protein_coding Homo_sapiens 0 1304
ENST00000584861 SAP30BP-012 retained_intron Homo_sapiens 0 335

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