C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141257 Cbx1-004 ENSMUSG00000018666 10090 + 11:96789175-96801405 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonLungOvaryTestisENSMUST00000141257
Transcript ID Adrenal Colon Lung Ovary Testis
ENSMUST00000141257 65.494±17.12 9.331±0.00 7.755±0.00 35.196±15.20 18.480±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097B CIL_00097B_0002 VISTA 11:96441475-97042608
CIL_0007WA CIL_0007WA_0002 VISTA 11:96526222-97127190
CIL_0007RQ CIL_0007RQ_0002 VISTA 11:96583318-97187851

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225603 CBX1-001 protein_coding Homo_sapiens 0 388
ENST00000393408 CBX1-002 protein_coding Homo_sapiens 0 243
ENST00000402583 CBX1-004 protein_coding Homo_sapiens 0 281
ENST00000444685 CBX1-003 protein_coding Homo_sapiens 0 241
ENST00000495350 CBX1-005 protein_coding Homo_sapiens 0 259
ENST00000581003 CBX1-006 protein_coding Homo_sapiens 0 243

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