C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tectonic family member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141281 Tctn1-002 ENSMUSG00000038593 10090 - 5:122241287-122264460 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000141281
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000141281 6.301±0.00 1.963±0.00 3.841±0.08 7.399±2.85 3.405±0.46 0.694±0.00 3.071±0.75 0.769±0.18 4.651±0.50 0.266±0.00 7.561±2.82 2.390±0.45 15.859±0.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000903 CIL_000903_0002 VISTA 5:121732502-122333355
CIL_0008YU CIL_0008YU_0002 VISTA 5:121792218-122394768
CIL_0004PJ CIL_0004PJ_0002 CGP 5:122206804-122264460
CIL_0004PK CIL_0004PK_0002 CGP 5:122241287-122324281

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0001841 IMP neural tube formation
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0008589 IMP regulation of smoothened signaling pathway
GO:0016020 IDA membrane
GO:0021523 IMP somatic motor neuron differentiation
GO:0021537 IMP telencephalon development
GO:0021904 IMP dorsal/ventral neural tube patterning
GO:0021956 IMP central nervous system interneuron axonogenesis
GO:0036038 IDA TCTN-B9D complex

Homologs

No Homologs available.

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