C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tRNA methyltransferase 10B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141659 Trmt10b-005 ENSMUSG00000035601 10090 + 4:45300414-45308721 processed_transcript

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryENSMUST00000141659
Transcript ID Adrenal Ovary
ENSMUST00000141659 0.136±0.00 0.493±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TI CIL_0006TI_0002 CGP 4:45184875-45316131
CIL_00081A CIL_00081A_0002 VISTA 4:45205842-45807105
CIL_0006TH CIL_0006TH_0002 CGP 4:45297127-45342732

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297994 TRMT10B-001 protein_coding Homo_sapiens 0 497
ENST00000377753 TRMT10B-201 protein_coding Homo_sapiens 0 241
ENST00000377754 TRMT10B-002 protein_coding Homo_sapiens 0 385
ENST00000488673 TRMT10B-003 nonsense_mediated_decay Homo_sapiens 0 261
ENST00000509577 TRMT10B-008 retained_intron Homo_sapiens 6e-18 95
ENST00000537016 TRMT10B-007 nonsense_mediated_decay Homo_sapiens 0 259
ENST00000537911 TRMT10B-202 protein_coding Homo_sapiens 0 259
ENST00000538370 TRMT10B-004 nonsense_mediated_decay Homo_sapiens 4e-34 148
ENST00000540616 TRMT10B-005 nonsense_mediated_decay Homo_sapiens 0 263

Loading