C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal sequence receptor, delta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141721 Ssr4-003 ENSMUSG00000002014 10090 + X:73787184-73790826 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverLungOvaryPlacentaTestisENSMUST00000141721
Transcript ID Adipose Bladder Brain Breast Heart Liver Lung Ovary Placenta Testis
ENSMUST00000141721 5.631±0.26 4.476±1.15 4.132±1.10 4.371±0.53 1.744±0.17 6.025±1.36 3.277±0.09 6.527±2.01 4.741±0.00 0.885±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UU CIL_0001UU_0002 CGP X:73778963-73790830
CIL_0001UT CIL_0001UT_0002 CGP X:73787028-73824969

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320857 SSR4-005 protein_coding Homo_sapiens 0 219
ENST00000370085 SSR4-001 protein_coding Homo_sapiens 3e-20 102
ENST00000370086 SSR4-006 protein_coding Homo_sapiens 0 219
ENST00000370087 SSR4-009 protein_coding Homo_sapiens 0 219
ENST00000460616 SSR4-008 processed_transcript Homo_sapiens 0 222
ENST00000471724 SSR4-011 processed_transcript Homo_sapiens 2.8026e-45 185
ENST00000471880 SSR4-012 processed_transcript Homo_sapiens 0 213
ENST00000482902 SSR4-007 processed_transcript Homo_sapiens 3e-21 108
ENST00000485612 SSR4-003 processed_transcript Homo_sapiens 0 222
ENST00000486204 SSR4-002 processed_transcript Homo_sapiens 0 219
ENST00000491833 SSR4-010 processed_transcript Homo_sapiens 2e-20 104

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