C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | transmembrane protein 50B | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000141885  |
Tmem50b-002 |
ENSMUSG00000022964 |
10090 | - |
16:91580202-91597800  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007UY | CIL_0007UY_0002 | VISTA | 16:90990868-91593443 |
| CIL_0003V2 | CIL_0003V2_0002 | CGP | 16:91547072-91597800 |
| CIL_00021F | CIL_00021F_0002 | CGP | 16:91574503-91619026 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000420455
|
TMEM50B-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 324 |
|
ENST00000432504
|
TMEM50B-005 | protein_coding | Homo_sapiens | 4.00001e-40 | 169 |
|
ENST00000442441
|
TMEM50B-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 324 |
|
ENST00000474272
|
TMEM50B-006 | retained_intron | Homo_sapiens | 0 | 217 |
|
ENST00000542230
|
TMEM50B-001 | protein_coding | Homo_sapiens | 0 | 324 |
|
ENST00000571778
|
TMEM50B-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 324 |
|
ENST00000573342
|
TMEM50B-006 | retained_intron | Homo_sapiens | 0 | 217 |
|
ENST00000573374
|
TMEM50B-001 | protein_coding | Homo_sapiens | 0 | 324 |
|
ENST00000573687
|
TMEM50B-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 324 |
|
ENST00000574612
|
TMEM50B-005 | protein_coding | Homo_sapiens | 4.00001e-40 | 169 |
|
ENST00000603942
|
CTC-471J1.10-001 | processed_pseudogene | Homo_sapiens | 0 | 252 |
