C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SET domain containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141900 Setd6-002 ENSMUSG00000031671 10090 + 8:95716611-95718519 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENSMUST00000141900
Transcript ID Brain Testis
ENSMUST00000141900 14.554±0.00 8.882±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Z0 CIL_0008Z0_0002 VISTA 8:95126508-95728314
CIL_0004IY CIL_0004IY_0002 CGP 8:95676980-95719010
CIL_0004IZ CIL_0004IZ_0002 CGP 8:95715915-95807462

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219315 SETD6-003 protein_coding Homo_sapiens 0 226
ENST00000310682 SETD6-001 protein_coding Homo_sapiens 0 226
ENST00000394266 SETD6-006 protein_coding Homo_sapiens 0 226
ENST00000422445 SETD6-004 nonsense_mediated_decay Homo_sapiens 0 226
ENST00000427443 SETD6-002 nonsense_mediated_decay Homo_sapiens 0 226
ENST00000447443 SETD6-009 protein_coding Homo_sapiens 0 226
ENST00000463954 SETD6-012 retained_intron Homo_sapiens 0 226
ENST00000491587 SETD6-013 retained_intron Homo_sapiens 0 228

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