| Transcript ID | Muscle |
|---|---|
| ENSMUST00000142086 | 0.029±0.01 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | breast cancer 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000142086  |
Brca1-002 |
ENSMUSG00000017146 |
10090 | - |
11:101525507-101551955  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00061F | CIL_00061F_0002 | CGP | 11:101464999-101551955 |
| CIL_00040M | CIL_00040M_0002 | CGP | 11:101488764-101581951 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000352993
|
BRCA1-029 | protein_coding | Homo_sapiens | 0 | 307 |
|
ENST00000354071
|
BRCA1-012 | protein_coding | Homo_sapiens | 0 | 828 |
|
ENST00000357654
|
BRCA1-001 | protein_coding | Homo_sapiens | 0 | 828 |
|
ENST00000412061
|
BRCA1-026 | non_stop_decay | Homo_sapiens | 0 | 678 |
|
ENST00000461221
|
BRCA1-010 | nonsense_mediated_decay | Homo_sapiens | 0 | 824 |
|
ENST00000461798
|
BRCA1-020 | nonsense_mediated_decay | Homo_sapiens | 0 | 268 |
|
ENST00000468300
|
BRCA1-007 | protein_coding | Homo_sapiens | 0 | 302 |
|
ENST00000470026
|
BRCA1-011 | protein_coding | Homo_sapiens | 0 | 828 |
|
ENST00000471181
|
BRCA1-005 | protein_coding | Homo_sapiens | 0 | 828 |
|
ENST00000473961
|
BRCA1-018 | protein_coding | Homo_sapiens | 0 | 468 |
|
ENST00000476777
|
BRCA1-017 | protein_coding | Homo_sapiens | 0 | 307 |
|
ENST00000477152
|
BRCA1-004 | protein_coding | Homo_sapiens | 0 | 828 |
|
ENST00000478531
|
BRCA1-009 | protein_coding | Homo_sapiens | 0 | 302 |
|
ENST00000489037
|
BRCA1-016 | protein_coding | Homo_sapiens | 2.8026e-45 | 185 |
|
ENST00000491747
|
BRCA1-014 | protein_coding | Homo_sapiens | 0 | 302 |
|
ENST00000492859
|
BRCA1-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 656 |
|
ENST00000493795
|
BRCA1-006 | protein_coding | Homo_sapiens | 0 | 828 |
|
ENST00000493919
|
BRCA1-008 | protein_coding | Homo_sapiens | 6e-23 | 113 |
|
ENST00000494123
|
BRCA1-013 | protein_coding | Homo_sapiens | 0 | 656 |
|
ENST00000497488
|
BRCA1-003 | protein_coding | Homo_sapiens | 0 | 497 |
