C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142342 Ttc4-002 ENSMUSG00000025413 10090 - 4:106662260-106678686 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENSMUST00000142342
Transcript ID Ovary Testis
ENSMUST00000142342 6.547±1.67 44.262±14.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085J CIL_00085J_0002 VISTA 4:106564211-107167561

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371281 TTC4-001 protein_coding Homo_sapiens 0 1099
ENST00000371284 TTC4-002 processed_transcript Homo_sapiens 0 1096
ENST00000414150 MROH7-TTC4-004 nonsense_mediated_decay Homo_sapiens 0 1092
ENST00000425300 MROH7-TTC4-002 nonsense_mediated_decay Homo_sapiens 0 1092
ENST00000427137 TTC4P1-001 processed_pseudogene Homo_sapiens 0 924
ENST00000460155 MROH7-TTC4-003 retained_intron Homo_sapiens 0 1092
ENST00000486621 TTC4-004 retained_intron Homo_sapiens 0 346
ENST00000606515 MROH7-TTC4-001 nonsense_mediated_decay Homo_sapiens 0 704

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