C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lymphocyte specific 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142408 Lsp1-011 ENSMUSG00000018819 10090 + 7:142489813-142494517 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000142408
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000142408 107.435±64.23 4.765±0.92 72.681±14.85 29.859±3.74 5.156±0.42 1.896±1.91 28.447±3.20 12.157±1.41 54.716±22.10 39.898±39.96 2.472±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MR CIL_0008MR_0002 VISTA 7:142247512-142849546
CIL_0007RG CIL_0007RG_0002 VISTA 7:142251566-142854813
CIL_00097V CIL_00097V_0002 VISTA 7:142268912-142873912
CIL_0005ML CIL_0005ML_0003 CGP 7:142441808-142494867
CIL_0005NK CIL_0005NK_0003 CGP 7:142460809-142506771

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000449530 LSP1P3-001 processed_pseudogene Homo_sapiens 1.4013e-45 185
ENST00000599825 RP11-458I4.1-001 processed_pseudogene Homo_sapiens 9e-25 115

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