C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142451 Ddx55-005 ENSMUSG00000029389 10090 + 5:124561899-124567875 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryENSMUST00000142451
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary
ENSMUST00000142451 2.266±0.00 3.458±0.27 3.078±0.78 2.508±0.52 1.029±0.12 0.694±0.17 2.246±0.04 2.754±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003J8 CIL_0003J8_0002 CGP 5:124540695-124569660
CIL_000395 CIL_000395_0002 CGP 5:124552864-124579131

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000238146 DDX55-001 protein_coding Homo_sapiens 0 278
ENST00000354291 DDX55-012 nonsense_mediated_decay Homo_sapiens 0 276
ENST00000538744 DDX55-004 protein_coding Homo_sapiens 5e-33 147
ENST00000539934 DDX55-002 retained_intron Homo_sapiens 0 278
ENST00000541259 DDX55-015 processed_transcript Homo_sapiens 0 276
ENST00000542286 DDX55-003 retained_intron Homo_sapiens 0 278
ENST00000543016 DDX55-013 retained_intron Homo_sapiens 0.00000000002 73
ENST00000544738 DDX55-009 nonsense_mediated_decay Homo_sapiens 0 278

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