C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: jumonji domain containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142495 Jmjd6-002 ENSMUSG00000056962 10090 - 11:116837433-116843355 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000FJ CIL_0000FJ_0002 CGP 11:116803062-116843449
CIL_0003KF CIL_0003KF_0003 CGP 11:116837432-116854263

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001568 IMP blood vessel development
GO:0001822 IMP kidney development
GO:0004872 IDA receptor activity
GO:0005886 IDA plasma membrane
GO:0007166 IDA cell surface receptor signaling pathway
GO:0007507 IMP heart development
GO:0030324 IMP lung development
GO:0033077 IMP T cell differentiation in thymus
GO:0042116 IMP macrophage activation
GO:0043277 IMP apoptotic cell clearance
GO:0043654 IDA recognition of apoptotic cell
GO:0048821 IMP erythrocyte development
GO:0060041 IMP retina development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303996 JMJD6-003 nonsense_mediated_decay Homo_sapiens 0 1151
ENST00000397625 JMJD6-004 protein_coding Homo_sapiens 0 1088
ENST00000445478 JMJD6-001 protein_coding Homo_sapiens 0 1151
ENST00000542934 JMJD6-002 nonsense_mediated_decay Homo_sapiens 0 1151
ENST00000585429 JMJD6-005 protein_coding Homo_sapiens 0 1075
ENST00000589982 JMJD6-007 retained_intron Homo_sapiens 0 316
ENST00000591460 JMJD6-006 retained_intron Homo_sapiens 0 313
ENST00000617192 JMJD6-201 protein_coding Homo_sapiens 0 1151

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