C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: CREB3 regulatory factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142539 Crebrf-002 ENSMUSG00000048249 10090 + 17:26715710-26764259 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000142539
Transcript ID Testis
ENSMUST00000142539 3.952±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KN CIL_0008KN_0002 VISTA 17:26208852-26810691
CIL_000915 CIL_000915_0002 VISTA 17:26527896-27128643
CIL_0008HF CIL_0008HF_0002 VISTA 17:26563571-27166666
CIL_00023T CIL_00023T_0002 CGP 17:26676396-26776635
CIL_00023P CIL_00023P_0002 CGP 17:26715650-26792565

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016604 IDA nuclear body
GO:0042711 IGI maternal behavior
GO:0043565 IEA sequence-specific DNA binding
GO:1900170 IDA negative regulation of glucocorticoid mediated signaling pathway
GO:1902213 IMP positive regulation of prolactin signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296953 CREBRF-001 protein_coding Homo_sapiens 0 2292
ENST00000520420 CREBRF-004 protein_coding Homo_sapiens 0 1519
ENST00000520464 CREBRF-005 retained_intron Homo_sapiens 0 1775
ENST00000522692 CREBRF-003 protein_coding Homo_sapiens 0 1519
ENST00000523161 CREBRF-008 protein_coding Homo_sapiens 7e-22 108

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