C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interactor of little elongation complex ELL subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142743 Narg2-004 ENSMUSG00000032235 10090 + 9:69397923-69432070 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000142743
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000142743 0.457±0.13 0.482±0.03 0.259±0.00 0.604±0.04 0.292±0.00 0.267±0.11 0.163±0.04 0.398±0.00 0.353±0.08 0.593±0.00 0.095±0.00 0.608±0.06 0.386±0.06 0.215±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GZ CIL_0005GZ_0002 CGP 9:68653786-69433122
CIL_0007LQ CIL_0007LQ_0002 UCNEbase 9:69347863-69845139

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261520 ICE2-001 protein_coding Homo_sapiens 0 907
ENST00000483823 ICE2P2-001 processed_pseudogene Homo_sapiens 0 872
ENST00000512800 ICE2P1-001 processed_pseudogene Homo_sapiens 0 595
ENST00000558121 ICE2-007 retained_intron Homo_sapiens 0 289
ENST00000558181 ICE2-002 nonsense_mediated_decay Homo_sapiens 0 1083
ENST00000558512 ICE2-005 protein_coding Homo_sapiens 0 684
ENST00000558654 ICE2-010 processed_transcript Homo_sapiens 0 305
ENST00000560072 ICE2-015 protein_coding Homo_sapiens 1.4013e-45 187
ENST00000560406 ICE2-014 protein_coding Homo_sapiens 1.4013e-45 187
ENST00000560520 ICE2-009 protein_coding Homo_sapiens 1.4013e-45 187
ENST00000560668 ICE2-008 nonsense_mediated_decay Homo_sapiens 0 453
ENST00000560895 ICE2-012 nonsense_mediated_decay Homo_sapiens 0 202
ENST00000561087 ICE2-013 processed_transcript Homo_sapiens 0 383
ENST00000561114 ICE2-004 protein_coding Homo_sapiens 0 815
ENST00000561124 ICE2-018 processed_transcript Homo_sapiens 0 287
ENST00000561328 ICE2-006 retained_intron Homo_sapiens 0 193
ENST00000561446 ICE2-011 nonsense_mediated_decay Homo_sapiens 0 479

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