C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: TNF receptor-associated factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143395 Traf3-004 ENSMUSG00000021277 10090 + 12:111248483-111262560 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000143395
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000143395 5.593±0.00 5.086±0.00 5.562±0.30 0.608±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AG CIL_0009AG_0002 VISTA 12:110842738-111443613
CIL_00040T CIL_00040T_0002 CGP 12:111166370-111276426

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000347662 TRAF3-201 protein_coding Homo_sapiens 0 1698
ENST00000351691 TRAF3-004 protein_coding Homo_sapiens 0 1639
ENST00000392745 TRAF3-005 protein_coding Homo_sapiens 0 1882
ENST00000539721 TRAF3-002 protein_coding Homo_sapiens 0 1312
ENST00000558700 TRAF3-007 nonsense_mediated_decay Homo_sapiens 0 366
ENST00000559734 TRAF3-008 protein_coding Homo_sapiens 0 848
ENST00000560371 TRAF3-001 protein_coding Homo_sapiens 0 1930

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