C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S27A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143418 Rps27a-001 ENSMUSG00000020460 10090 - 11:29547116-29547891 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryENSMUST00000143418
Transcript ID Adrenal Ovary
ENSMUST00000143418 1.419±0.16 4.103±0.98

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272317 RPS27A-001 protein_coding Homo_sapiens 3e-18 97
ENST00000302182 UBB-001 protein_coding Homo_sapiens 0.0000000008 69
ENST00000329806 RP11-558O12.1-001 processed_pseudogene Homo_sapiens 0.000000000000003 86
ENST00000392399 UBBP1-001 processed_pseudogene Homo_sapiens 0.00000000008 71
ENST00000395837 UBB-002 protein_coding Homo_sapiens 0.0000000006 69
ENST00000395839 UBB-003 protein_coding Homo_sapiens 0.0000000006 69
ENST00000402285 RPS27A-003 protein_coding Homo_sapiens 2e-18 97
ENST00000402798 RP11-367G18.2-001 processed_pseudogene Homo_sapiens 0.000000000000003 86
ENST00000404735 RPS27A-002 protein_coding Homo_sapiens 2e-18 97
ENST00000422792 AC079807.3-001 processed_pseudogene Homo_sapiens 0.0000000000001 81
ENST00000429552 RP4-814D15.2-001 processed_pseudogene Homo_sapiens 0.000000000000003 86
ENST00000434254 AC008072.1-001 processed_pseudogene Homo_sapiens 0.0000000000002 81
ENST00000443181 MIR4426-001 processed_pseudogene Homo_sapiens 0.000000000000003 86
ENST00000449323 RPS27A-004 protein_coding Homo_sapiens 1e-18 97
ENST00000468810 RPS27A-010 retained_intron Homo_sapiens 2e-18 97
ENST00000471772 RPS27A-009 retained_intron Homo_sapiens 7e-22 108
ENST00000478196 RPS27A-008 retained_intron Homo_sapiens 2e-18 97
ENST00000492222 RP11-51O6.1-001 transcribed_processed_pseudogene Homo_sapiens 6e-17 92
ENST00000494756 RPS27A-012 retained_intron Homo_sapiens 7e-22 108
ENST00000495843 RPS27A-005 retained_intron Homo_sapiens 3e-18 97
ENST00000535788 UBB-005 protein_coding Homo_sapiens 0.0000000004 69
ENST00000577640 UBB-008 protein_coding Homo_sapiens 0.0000000005 69
ENST00000577958 UBB-006 protein_coding Homo_sapiens 0.0000000002 69
ENST00000578706 UBB-007 protein_coding Homo_sapiens 0.0000000003 69
ENST00000591758 RP11-51O6.1-002 processed_transcript Homo_sapiens 8e-17 92
ENST00000611893 RPS27A-201 protein_coding Homo_sapiens 2e-18 97
ENST00000614404 UBB-201 protein_coding Homo_sapiens 0.0000000007 69

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