C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L31, pseudogene 14
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143596 Rpl31-ps14-001 ENSMUSG00000094191 10090 - 1:66948563-66948940 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000143596
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000143596 0.390±0.18 17.655±5.23 5.231±3.74 0.283±0.05 0.302±0.00 0.246±0.16 0.281±0.11 7.449±10.53 0.388±0.12 0.298±0.05 0.372±0.05 0.537±0.27 0.152±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AJ CIL_0000AJ_0003 CGP 1:66924295-67038872

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000075402 rpl31-201 protein_coding Danio_rerio 0 267
ENSDART00000149851 rpl31-002 protein_coding Danio_rerio 0 267
ENSDART00000149554 rpl31-001 protein_coding Danio_rerio 0 267
ENSDART00000148688 rpl31-003 retained_intron Danio_rerio 0 244
ENSDART00000148984 rpl31-004 retained_intron Danio_rerio 8e-25 117
ENST00000264258 RPL31-001 protein_coding Homo_sapiens 0 488
ENST00000406329 RPL31P28-001 processed_pseudogene Homo_sapiens 0 307
ENST00000409000 RPL31-006 protein_coding Homo_sapiens 0 350
ENST00000409028 RPL31-007 protein_coding Homo_sapiens 0 435
ENST00000409038 RPL31-008 protein_coding Homo_sapiens 0 436
ENST00000409320 RPL31-002 protein_coding Homo_sapiens 0 435
ENST00000409650 RPL31-009 protein_coding Homo_sapiens 0 438
ENST00000409711 RPL31-004 protein_coding Homo_sapiens 0 350
ENST00000409733 RPL31-010 protein_coding Homo_sapiens 0 488
ENST00000419276 RPL31-003 nonsense_mediated_decay Homo_sapiens 0 350
ENST00000426558 RPL31P11-002 processed_transcript Homo_sapiens 0 405
ENST00000427776 RP11-458F8.3-001 processed_pseudogene Homo_sapiens 0 335
ENST00000431058 RPL31P35-001 processed_pseudogene Homo_sapiens 0 392
ENST00000431088 AC016712.2-001 processed_pseudogene Homo_sapiens 0 438
ENST00000441435 RPL31-011 protein_coding Homo_sapiens 0 377
ENST00000441577 RP11-560I19.2-001 processed_pseudogene Homo_sapiens 0 374
ENST00000447680 RP11-346D6.4-001 processed_pseudogene Homo_sapiens 0 387
ENST00000449702 AC104306.1-001 processed_pseudogene Homo_sapiens 0 359
ENST00000454082 RPL31P11-001 transcribed_processed_pseudogene Homo_sapiens 0 405
ENST00000455434 RP11-420H19.3-001 processed_pseudogene Homo_sapiens 0 357
ENST00000456292 RPL31-005 protein_coding Homo_sapiens 0 435
ENST00000462248 RP11-147I3.1-001 transcribed_processed_pseudogene Homo_sapiens 0 361
ENST00000480540 RP11-112J1.1-001 processed_pseudogene Homo_sapiens 0 431
ENST00000487111 RP11-147I3.1-003 processed_transcript Homo_sapiens 0 254
ENST00000490759 RPL31P49-001 processed_pseudogene Homo_sapiens 0 407
ENST00000498412 RP1-102E24.1-001 processed_pseudogene Homo_sapiens 0 420
ENST00000518463 RP11-267M23.6-001 processed_pseudogene Homo_sapiens 0 296
ENST00000525104 RP11-147I3.1-002 processed_transcript Homo_sapiens 0 361
ENST00000529570 RP11-147I3.1-004 processed_transcript Homo_sapiens 0 361

Loading