C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | RAB guanine nucleotide exchange factor (GEF) 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000143727  |
Rabgef1-005 |
ENSMUSG00000025340 |
10090 | + |
5:130187220-130191321  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005UP | CIL_0005UP_0002 | CGP | 5:130144861-130214342 |
| CIL_000256 | CIL_000256_0002 | CGP | 5:130171798-130243765 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000284957
|
RABGEF1-001 | protein_coding | Homo_sapiens | 0 | 444 |
|
ENST00000380828
|
RABGEF1-201 | protein_coding | Homo_sapiens | 0 | 444 |
|
ENST00000411606
|
GS1-124K5.2-003 | transcribed_unprocessed_pseudogene | Homo_sapiens | 0 | 231 |
|
ENST00000428370
|
GS1-124K5.12-001 | unprocessed_pseudogene | Homo_sapiens | 0 | 296 |
|
ENST00000437078
|
RABGEF1-202 | protein_coding | Homo_sapiens | 0 | 446 |
|
ENST00000439720
|
RABGEF1-003 | protein_coding | Homo_sapiens | 0 | 444 |
|
ENST00000442563
|
RABGEF1-005 | protein_coding | Homo_sapiens | 0 | 230 |
|
ENST00000449786
|
AC005077.7-001 | unprocessed_pseudogene | Homo_sapiens | 0 | 244 |
|
ENST00000450873
|
RABGEF1-002 | protein_coding | Homo_sapiens | 0 | 444 |
|
ENST00000484547
|
RABGEF1-004 | processed_transcript | Homo_sapiens | 0 | 268 |
|
ENST00000503687
|
KCTD7-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 268 |
|
ENST00000510829
|
RABGEF1-203 | protein_coding | Homo_sapiens | 0 | 442 |
|
ENST00000607882
|
RABGEF1-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 446 |
