C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | predicted gene 21981 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000143789  |
Gm21981-001 |
ENSMUSG00000079444 |
10090 | - |
17:47686739-47694455  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000963 | CIL_000963_0002 | VISTA | 17:47571879-48173076 |
| CIL_00093V | CIL_00093V_0002 | VISTA | 17:47614773-48215356 |
| CIL_0001ZL | CIL_0001ZL_0002 | CGP | 17:47686739-47694736 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0008270 | IEA | zinc ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000335515
|
PRICKLE4-001 | nonsense_mediated_decay | Homo_sapiens | 0 | 723 |
|
ENST00000359201
|
PRICKLE4-201 | protein_coding | Homo_sapiens | 3.00004e-41 | 174 |
|
ENST00000398881
|
TOMM6-002 | protein_coding | Homo_sapiens | 0 | 250 |
|
ENST00000398884
|
TOMM6-001 | protein_coding | Homo_sapiens | 0 | 219 |
|
ENST00000456057
|
PRICKLE4-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 219 |
|
ENST00000458694
|
PRICKLE4-202 | protein_coding | Homo_sapiens | 0 | 723 |
|
ENST00000487182
|
PRICKLE4-003 | retained_intron | Homo_sapiens | 0 | 250 |
|
ENST00000604597
|
RP11-712C19.1-001 | processed_pseudogene | Homo_sapiens | 7e-29 | 130 |
