C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sterile alpha motif domain containing 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144061 Samd8-002 ENSMUSG00000021770 10090 + 14:21750548-21793302 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000144061
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000144061 3.066±0.72 16.204±4.14 3.934±0.57 5.461±1.57 2.357±0.12 4.343±1.01 3.094±0.60 4.200±0.27 9.946±3.44 3.986±0.00 15.996±6.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082Q CIL_00082Q_0002 VISTA 14:21162242-21763695
CIL_0007JX CIL_0007JX_0002 UCNEbase 14:21252402-23394598
CIL_0008UO CIL_0008UO_0002 VISTA 14:21553194-22153685
CIL_000925 CIL_000925_0002 VISTA 14:21565849-22167377
CIL_00084B CIL_00084B_0002 VISTA 14:21666827-22268239
CIL_0006DL CIL_0006DL_0003 CGP 14:21676582-21751181
CIL_0008K8 CIL_0008K8_0002 VISTA 14:21690858-22291990
CIL_0007IJ CIL_0007IJ_0002 CGP 14:21733394-21798725
CIL_0007IK CIL_0007IK_0002 CGP 14:21750531-21845879

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372687 SAMD8-001 protein_coding Homo_sapiens 0 1354
ENST00000372690 SAMD8-002 protein_coding Homo_sapiens 0 1783
ENST00000447533 SAMD8-003 protein_coding Homo_sapiens 0 1051
ENST00000542569 SAMD8-201 protein_coding Homo_sapiens 0 1783

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