C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: syntaxin 1A (brain)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144198 Stx1a-004 ENSMUSG00000007207 10090 + 5:135041266-135048939 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonMuscleENSMUST00000144198
Transcript ID Colon Muscle
ENSMUST00000144198 2.672±0.00 0.202±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000344 CIL_000344_0002 CGP 5:135023482-135064959

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000215095 STX1B-001 protein_coding Homo_sapiens 0 357
ENST00000222812 STX1A-001 protein_coding Homo_sapiens 0 612
ENST00000395154 STX1A-010 protein_coding Homo_sapiens 0 630
ENST00000395155 STX1A-003 protein_coding Homo_sapiens 0 610
ENST00000395156 STX1A-002 protein_coding Homo_sapiens 0 610
ENST00000461441 STX1A-013 retained_intron Homo_sapiens 0 390
ENST00000470878 STX1A-004 processed_transcript Homo_sapiens 0 610
ENST00000480126 STX1A-011 processed_transcript Homo_sapiens 0 472
ENST00000491427 STX1A-008 retained_intron Homo_sapiens 0 472
ENST00000494245 STX1A-006 retained_intron Homo_sapiens 0 401
ENST00000496216 STX1A-005 processed_transcript Homo_sapiens 0 610
ENST00000497980 STX1A-009 retained_intron Homo_sapiens 0 305
ENST00000565419 STX1B-003 protein_coding Homo_sapiens 0 357
ENST00000569638 STX1B-002 protein_coding Homo_sapiens 0 340

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