C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synovial apoptosis inhibitor 1, synoviolin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144328 Syvn1-007 ENSMUSG00000024807 10090 + 19:6047085-6049651 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698
CIL_0002MM CIL_0002MM_0002 CGP 19:6046576-6057751

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294256 SYVN1-002 protein_coding Homo_sapiens 0 634
ENST00000307289 SYVN1-011 protein_coding Homo_sapiens 0 610
ENST00000377190 SYVN1-001 protein_coding Homo_sapiens 0 634
ENST00000449943 SYVN1-003 retained_intron Homo_sapiens 0 621
ENST00000525874 SYVN1-008 retained_intron Homo_sapiens 0 350
ENST00000526060 SYVN1-004 protein_coding Homo_sapiens 0 580
ENST00000526121 SYVN1-014 processed_transcript Homo_sapiens 1e-34 150
ENST00000527142 SYVN1-009 nonsense_mediated_decay Homo_sapiens 0 571
ENST00000528487 SYVN1-005 protein_coding Homo_sapiens 0 289
ENST00000529207 SYVN1-006 retained_intron Homo_sapiens 0 350
ENST00000531018 SYVN1-007 protein_coding Homo_sapiens 0 350
ENST00000532771 SYVN1-015 nonsense_mediated_decay Homo_sapiens 0 473
ENST00000533685 SYVN1-013 retained_intron Homo_sapiens 0 204

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