| Transcript ID | Placenta |
|---|---|
| ENSMUST00000144473 | 5.342±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | nucleoporin 85 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000144473  |
Nup85-003 |
ENSMUSG00000020739 |
10090 | + |
11:115570115-115581843  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008PW | CIL_0008PW_0002 | VISTA | 11:115369788-115971497 |
| CIL_0007IA | CIL_0007IA_0002 | CGP | 11:115523102-115583985 |
| CIL_0007IW | CIL_0007IW_0002 | CGP | 11:115564434-115604051 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005737 | ISA | cytoplasm |
| GO:0005886 | ISA | plasma membrane |
| GO:0006935 | IDA | chemotaxis |
| GO:0019221 | ISA | cytokine-mediated signaling pathway |
| GO:0030032 | IDA | lamellipodium assembly |
| GO:0031727 | ISA | CCR2 chemokine receptor binding |
| GO:0048246 | IDA | macrophage chemotaxis |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000245544
|
NUP85-001 | protein_coding | Homo_sapiens | 0 | 479 |
|
ENST00000449421
|
NUP85-003 | processed_transcript | Homo_sapiens | 0 | 479 |
|
ENST00000577561
|
NUP85-013 | retained_intron | Homo_sapiens | 0 | 348 |
|
ENST00000579324
|
NUP85-002 | protein_coding | Homo_sapiens | 0 | 479 |
|
ENST00000579557
|
NUP85-025 | protein_coding | Homo_sapiens | 0 | 859 |
|
ENST00000581104
|
NUP85-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 479 |
|
ENST00000583877
|
NUP85-011 | protein_coding | Homo_sapiens | 0 | 466 |
|
ENST00000583948
|
NUP85-015 | processed_transcript | Homo_sapiens | 0 | 348 |
