C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, plasma membrane 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144507 Atp2b2-006 ENSMUSG00000030302 10090 - 6:113842331-113910582 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENSMUST00000144507
Transcript ID Breast
ENSMUST00000144507 0.222±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064R CIL_00064R_0002 CGP 6:113728067-114042613
CIL_0001NW CIL_0001NW_0002 CGP 6:113745669-114249886

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360273 ATP2B2-201 protein_coding Homo_sapiens 0 222
ENST00000383800 ATP2B2-002 protein_coding Homo_sapiens 0 222
ENST00000397077 ATP2B2-005 protein_coding Homo_sapiens 0 222
ENST00000460129 ATP2B2-004 nonsense_mediated_decay Homo_sapiens 0 222
ENST00000480680 ATP2B2-008 retained_intron Homo_sapiens 0 222

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