C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TNFAIP3 interacting protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144791 Tnip2-006 ENSMUSG00000059866 10090 - 5:34496089-34513997 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartLiverMuscleOvaryTestisENSMUST00000144791
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Liver Muscle Ovary Testis
ENSMUST00000144791 1.896±0.00 6.424±0.00 3.848±0.00 2.060±1.28 2.565±0.00 1.102±0.00 0.835±0.16 0.523±0.01 3.956±0.00 0.841±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OC CIL_0003OC_0003 CGP 5:34369933-34513997
CIL_0003SI CIL_0003SI_0002 CGP 5:34496087-34563638

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315423 TNIP2-001 protein_coding Homo_sapiens 0 704
ENST00000424288 RP11-169L17.5-001 processed_pseudogene Homo_sapiens 6.02558e-44 182
ENST00000503235 TNIP2-003 protein_coding Homo_sapiens 0 492
ENST00000505186 TNIP2-006 processed_transcript Homo_sapiens 0 316
ENST00000507686 TNIP2-005 retained_intron Homo_sapiens 0 298
ENST00000510267 TNIP2-002 protein_coding Homo_sapiens 0 512

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