C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ATP-binding cassette, sub-family A (ABC1), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144949 Abca4-010 ENSMUSG00000028125 10090 + 3:122162317-122164319 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENSMUST00000144949
Transcript ID Colon
ENSMUST00000144949 0.241±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DI CIL_0009DI_0002 VISTA 3:121653542-122254391
CIL_0009DJ CIL_0009DJ_0002 VISTA 3:121747471-122349247
CIL_0005PB CIL_0005PB_0003 CGP 3:121953229-122180061
CIL_0009DH CIL_0009DH_0002 VISTA 3:121992915-122594267

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370225 ABCA4-001 protein_coding Homo_sapiens 0 331
ENST00000465352 ABCA4-002 processed_transcript Homo_sapiens 0 331
ENST00000484388 ABCA4-006 processed_transcript Homo_sapiens 9e-39 163
ENST00000536513 ABCA4-201 protein_coding Homo_sapiens 0 331

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