C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tRNA selenocysteine 1 associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146166 Trnau1ap-002 ENSMUSG00000028898 10090 - 4:132311765-132329516 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000146166
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000146166 2.820±1.26 1.241±0.34 1.094±0.10 1.893±0.58 2.868±0.66 2.191±0.72 0.928±0.23 1.445±0.30 0.883±0.37 1.689±0.50 0.637±0.10 2.842±1.09 1.357±0.30 0.369±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099N CIL_00099N_0002 VISTA 4:131775516-132379227

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373830 TRNAU1AP-001 protein_coding Homo_sapiens 0 891
ENST00000411406 TRNAU1AP-006 processed_transcript Homo_sapiens 0 217
ENST00000464093 TRNAU1AP-005 processed_transcript Homo_sapiens 0 601
ENST00000464880 TRNAU1AP-007 processed_transcript Homo_sapiens 0 363
ENST00000480930 TRNAU1AP-002 processed_transcript Homo_sapiens 0 894
ENST00000484775 TRNAU1AP-010 processed_transcript Homo_sapiens 0 719
ENST00000491577 TRNAU1AP-004 processed_transcript Homo_sapiens 0 1236
ENST00000495215 TRNAU1AP-008 processed_transcript Homo_sapiens 0 324
ENST00000495995 TRNAU1AP-003 processed_transcript Homo_sapiens 0 322
ENST00000497790 TRNAU1AP-009 processed_transcript Homo_sapiens 0 375

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