C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MAM and LDL receptor class A domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146205 Malrd1-001 ENSMUSG00000075520 10090 + 2:16042126-16150806 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyLiverOvaryPlacentaTestisENSMUST00000146205
Transcript ID Brain Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000146205 0.076±0.00 0.619±0.43 1.719±0.86 0.051±0.00 0.040±0.00 0.048±0.03 0.160±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005A5 CIL_0005A5_0002 CGP 2:15049395-16150806
CIL_000237 CIL_000237_0002 CGP 2:16042126-16755839

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0016020 IEA membrane
GO:0042632 IMP cholesterol homeostasis
GO:0070858 IGI negative regulation of bile acid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377265 MALRD1-002 protein_coding Homo_sapiens 0 861
ENST00000377266 MALRD1-001 protein_coding Homo_sapiens 0 2106
ENST00000441070 MALRD1-004 protein_coding Homo_sapiens 0 675
ENST00000454679 MALRD1-201 protein_coding Homo_sapiens 0 4041

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