C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | PAX3 and PAX7 binding protein 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000146281  |
Paxbp1-003 |
ENSMUSG00000022974 |
10090 | - |
16:91024811-91030816  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008TI | CIL_0008TI_0002 | VISTA | 16:90804484-91407069 |
| CIL_00087M | CIL_00087M_0002 | VISTA | 16:90839145-91442270 |
| CIL_0009BQ | CIL_0009BQ_0002 | VISTA | 16:90840152-91441411 |
| CIL_000089 | CIL_000089_0002 | CGP | 16:90936092-91044543 |
| CIL_0007UY | CIL_0007UY_0002 | VISTA | 16:90990868-91593443 |
| CIL_0003TV | CIL_0003TV_0002 | CGP | 16:91014037-91095122 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000290178
|
PAXBP1-005 | protein_coding | Homo_sapiens | 0 | 835 |
|
ENST00000331923
|
PAXBP1-001 | protein_coding | Homo_sapiens | 0 | 835 |
|
ENST00000421049
|
PAXBP1-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 324 |
|
ENST00000443785
|
PAXBP1-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 941 |
|
ENST00000466846
|
PAXBP1-002 | retained_intron | Homo_sapiens | 0 | 1092 |
|
ENST00000497873
|
PAXBP1-003 | retained_intron | Homo_sapiens | 0 | 682 |
