C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exoribonuclease 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146384 Eri3-006 ENSMUSG00000033423 10090 + 4:117564758-117674297 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000146384
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000146384 11.887±4.11 12.545±7.17 14.659±2.06 7.779±0.00 11.736±7.20 5.956±1.47 12.075±2.60 18.143±8.25 10.914±3.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093U CIL_00093U_0002 VISTA 4:117090982-117692314
CIL_0008SF CIL_0008SF_0002 VISTA 4:117346906-117947610
CIL_0007OR CIL_0007OR_0002 UCNEbase 4:117349630-117647360
CIL_0009B8 CIL_0009B8_0002 VISTA 4:117528714-118131599

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372257 ERI3-001 protein_coding Homo_sapiens 0 1110
ENST00000372259 ERI3-003 protein_coding Homo_sapiens 0 1110
ENST00000452396 ERI3-004 protein_coding Homo_sapiens 0 435
ENST00000456170 ERI3-006 protein_coding Homo_sapiens 0 774
ENST00000457571 ERI3-002 protein_coding Homo_sapiens 0 399
ENST00000462341 ERI3-009 processed_transcript Homo_sapiens 0 231
ENST00000479101 ERI3-007 processed_transcript Homo_sapiens 0 189
ENST00000489710 ERI3-008 processed_transcript Homo_sapiens 0 291
ENST00000495828 ERI3-005 processed_transcript Homo_sapiens 0 399

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