C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transforming growth factor, beta receptor III
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146591 Tgfbr3-002 ENSMUSG00000029287 10090 - 5:107147980-107289595 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverLungOvaryTestisENSMUST00000146591
Transcript ID Adrenal Breast Colon Liver Lung Ovary Testis
ENSMUST00000146591 68.272±12.93 21.518±0.97 5.410±1.19 0.741±0.00 12.958±1.43 17.972±3.33 1.843±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DI CIL_0008DI_0002 VISTA 5:106921760-107524214
CIL_0008YV CIL_0008YV_0002 VISTA 5:106950899-107552442
CIL_00069I CIL_00069I_0002 CGP 5:106964322-107289629
CIL_0005ZR CIL_0005ZR_0002 CGP 5:107106570-107387058

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000212355 TGFBR3-201 protein_coding Homo_sapiens 0 946
ENST00000370399 TGFBR3-001 protein_coding Homo_sapiens 0 900
ENST00000465892 TGFBR3-002 protein_coding Homo_sapiens 0 918
ENST00000468996 TGFBR3-004 processed_transcript Homo_sapiens 0 562
ENST00000525962 TGFBR3-006 protein_coding Homo_sapiens 0 900
ENST00000532540 TGFBR3-008 nonsense_mediated_decay Homo_sapiens 0 876
ENST00000533089 TGFBR3-007 nonsense_mediated_decay Homo_sapiens 0 536

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