C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: nucleophosmin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146759 Npm1-005 ENSMUSG00000057113 10090 - 11:33156026-33157277 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00092S CIL_00092S_0002 VISTA 11:32891798-33493112
CIL_00097F CIL_00097F_0002 VISTA 11:32999598-33601607
CIL_00088M CIL_00088M_0002 VISTA 11:33042866-33643782
CIL_000977 CIL_000977_0002 VISTA 11:33092412-33693558
CIL_00098H CIL_00098H_0002 VISTA 11:33099828-33701076
CIL_0008SG CIL_0008SG_0002 VISTA 11:33129906-33731024
CIL_0004OL CIL_0004OL_0002 CGP 11:33152287-33203589

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296930 NPM1-001 protein_coding Homo_sapiens 0 294
ENST00000351986 NPM1-002 protein_coding Homo_sapiens 8e-25 119
ENST00000393820 NPM1-003 protein_coding Homo_sapiens 0 294
ENST00000399556 NPM1P46-001 processed_pseudogene Homo_sapiens 0 272
ENST00000403105 NPM1P37-001 processed_pseudogene Homo_sapiens 0 261
ENST00000412758 NPM1P40-001 processed_pseudogene Homo_sapiens 6e-17 92
ENST00000423757 NPM1P12-001 processed_pseudogene Homo_sapiens 0 255
ENST00000426339 NPM1P26-001 processed_pseudogene Homo_sapiens 0 230
ENST00000428039 NPM1P24-001 processed_pseudogene Homo_sapiens 0 252
ENST00000434232 NPM1P18-001 processed_pseudogene Homo_sapiens 0 291
ENST00000438918 NPM1P33-001 processed_pseudogene Homo_sapiens 0 213
ENST00000443470 NPM1P51-001 processed_pseudogene Homo_sapiens 0 239
ENST00000458237 NPM1P8-001 processed_pseudogene Homo_sapiens 0 285
ENST00000483112 NPM1P29-001 processed_pseudogene Homo_sapiens 0 272
ENST00000502784 NPM1P27-001 processed_pseudogene Homo_sapiens 0 315
ENST00000512920 NPM1P41-001 processed_pseudogene Homo_sapiens 3e-34 148
ENST00000513394 NPM1P21-001 processed_pseudogene Homo_sapiens 0 246
ENST00000517671 NPM1-004 protein_coding Homo_sapiens 0 294
ENST00000519955 NPM1-011 retained_intron Homo_sapiens 0 215
ENST00000521088 NPM1P6-001 processed_pseudogene Homo_sapiens 0 272
ENST00000532878 NPM1P50-001 processed_pseudogene Homo_sapiens 0 252
ENST00000533043 NPM1P35-001 processed_pseudogene Homo_sapiens 0 255

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