C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syndecan 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147013 Sdc2-002 ENSMUSG00000022261 10090 + 15:32920774-32921305 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverOvaryENSMUST00000147013
Transcript ID Adrenal Breast Colon Liver Ovary
ENSMUST00000147013 44.392±6.33 10.911±1.86 13.230±1.67 24.969±1.17 52.795±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SV CIL_0006SV_0002 CGP 15:32920723-33594552

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302190 SDC2-001 protein_coding Homo_sapiens 9e-19 100
ENST00000518385 SDC2-002 protein_coding Homo_sapiens 4e-19 100
ENST00000520233 SDC2-008 processed_transcript Homo_sapiens 1e-19 100

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