C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger and SCAN domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147125 Zscan2-004 ENSMUSG00000038797 10090 + 7:80860953-80875888 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverMuscleOvaryPlacentaTestisENSMUST00000147125
Transcript ID Breast Liver Muscle Ovary Placenta Testis
ENSMUST00000147125 0.247±0.00 0.415±0.20 0.283±0.16 3.434±0.81 0.797±0.00 33.739±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FE CIL_0008FE_0002 VISTA 7:80488938-81090184
CIL_0001HN CIL_0001HN_0002 CGP 7:80860920-80901269

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000113806 hnrnpa0l-201 protein_coding Danio_rerio 0.0000002 62
ENST00000252207 ZSCAN9-001 protein_coding Homo_sapiens 0.000008 57
ENST00000327179 ZSCAN2-001 protein_coding Homo_sapiens 0 1378
ENST00000334141 ZSCAN2-002 protein_coding Homo_sapiens 0 418
ENST00000379358 ZSCAN2-003 protein_coding Homo_sapiens 0 420
ENST00000425468 ZSCAN9-003 protein_coding Homo_sapiens 0.000009 57
ENST00000448803 ZSCAN2-007 protein_coding Homo_sapiens 0 1399
ENST00000485222 ZSCAN2-005 protein_coding Homo_sapiens 0 523
ENST00000527844 ZSCAN9-008 protein_coding Homo_sapiens 0.000006 57
ENST00000531979 ZSCAN9-002 protein_coding Homo_sapiens 0.000008 57
ENST00000538076 ZSCAN2-009 protein_coding Homo_sapiens 0 523
ENST00000540894 ZSCAN2-010 nonsense_mediated_decay Homo_sapiens 0 1387
ENST00000540936 ZSCAN2-011 protein_coding Homo_sapiens 0 261
ENST00000541040 ZSCAN2-008 protein_coding Homo_sapiens 0 523
ENST00000544719 ZNF285-001 protein_coding Homo_sapiens 0.0000000000002 82
ENST00000546148 ZSCAN2-006 protein_coding Homo_sapiens 0 1399
ENST00000546275 ZSCAN2-012 protein_coding Homo_sapiens 6e-37 158
ENST00000591679 ZNF285-005 protein_coding Homo_sapiens 0.0000000000002 82
ENST00000614994 ZNF285-002 protein_coding Homo_sapiens 0.0000000000005 82

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