C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cullin 4B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147129 Cul4b-002 ENSMUSG00000031095 10090 - X:38533570-38564662 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000147129
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000147129 0.675±0.00 0.959±0.21 2.644±0.00 1.058±0.37 0.791±0.23 0.412±0.00 1.667±0.01 0.508±0.07 1.245±0.49 1.348±0.48 12.905±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016X CIL_00016X_0003 CGP X:38401357-38576196
CIL_0000GD CIL_0000GD_0003 CGP X:38533274-38613426

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0031461 IEA cullin-RING ubiquitin ligase complex
GO:0031625 IEA ubiquitin protein ligase binding
GO:0045732 IMP positive regulation of protein catabolic process
GO:1900087 IMP positive regulation of G1/S transition of mitotic cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336592 CUL4B-004 protein_coding Homo_sapiens 0 2610
ENST00000371322 CUL4B-003 protein_coding Homo_sapiens 0 2734
ENST00000371323 CUL4B-007 protein_coding Homo_sapiens 0 952
ENST00000404115 CUL4B-001 protein_coding Homo_sapiens 0 2610
ENST00000467641 CUL4B-005 processed_transcript Homo_sapiens 0 898
ENST00000497616 CUL4B-006 processed_transcript Homo_sapiens 0 556

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