C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 2, subfamily r, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147428 Cyp2r1-004 ENSMUSG00000030670 10090 - 7:114550249-114562962 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastKidneyMuscleOvaryPlacentaTestisENSMUST00000147428
Transcript ID Bladder Breast Kidney Muscle Ovary Placenta Testis
ENSMUST00000147428 0.141±0.00 0.793±0.00 0.444±0.00 0.046±0.00 0.581±0.50 0.325±0.07 0.469±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZS CIL_0003ZS_0002 CGP 7:114415281-114562972

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005506 IEA iron ion binding
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 IEA heme binding
GO:0030343 IDA vitamin D3 25-hydroxylase activity
GO:0036378 IDA calcitriol biosynthetic process from calciol
GO:0042359 IDA vitamin D metabolic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334636 CYP2R1-001 protein_coding Homo_sapiens 0 839
ENST00000525015 CYP2R1-006 nonsense_mediated_decay Homo_sapiens 0 364
ENST00000526489 CYP2R1-009 processed_transcript Homo_sapiens 4e-36 156
ENST00000530609 CYP2R1-004 nonsense_mediated_decay Homo_sapiens 0 839
ENST00000532378 CYP2R1-003 protein_coding Homo_sapiens 0 839
ENST00000532805 CYP2R1-005 nonsense_mediated_decay Homo_sapiens 0 353
ENST00000534686 CYP2R1-002 nonsense_mediated_decay Homo_sapiens 0 366

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