| Transcript ID | Breast |
|---|---|
| ENSMUST00000147466 | 2.190±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | SET domain containing 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000147466  |
Setd3-003 |
ENSMUSG00000056770 |
10090 | - |
12:108117034-108179263  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007KT | CIL_0007KT_0002 | UCNEbase | 12:107085268-108123079 |
| CIL_0005H1 | CIL_0005H1_0002 | CGP | 12:107910403-108179314 |
| CIL_0009CK | CIL_0009CK_0002 | VISTA | 12:107949271-108552884 |
| CIL_0003HD | CIL_0003HD_0002 | CGP | 12:108106431-108203359 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000790 | IDA | nuclear chromatin |
| GO:0001102 | IPI | RNA polymerase II activating transcription factor binding |
| GO:0010452 | IDA | histone H3-K36 methylation |
| GO:0042800 | IDA | histone methyltransferase activity (H3-K4 specific) |
| GO:0045944 | IDA | positive regulation of transcription from RNA polymerase II promoter |
| GO:0046975 | IDA | histone methyltransferase activity (H3-K36 specific) |
| GO:0051149 | IMP | positive regulation of muscle cell differentiation |
| GO:0051568 | IDA | histone H3-K4 methylation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000329331
|
SETD3-003 | protein_coding | Homo_sapiens | 0 | 688 |
|
ENST00000331768
|
SETD3-001 | protein_coding | Homo_sapiens | 0 | 688 |
|
ENST00000357563
|
SETD3-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 1079 |
|
ENST00000436070
|
SETD3-002 | protein_coding | Homo_sapiens | 0 | 704 |
|
ENST00000446066
|
SETD3-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 776 |
|
ENST00000453764
|
SETD3-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 1062 |
|
ENST00000453938
|
SETD3-007 | processed_transcript | Homo_sapiens | 0 | 676 |
